zagor@yumi:~/HandBrake$ pwd
/home/zagor/HandBrake

zagor@yumi:~/HandBrake$ ./HandBrakeCLI 
bash: ./HandBrakeCLI: No such file or directory

zagor@yumi:~/HandBrake$ /home/zagor/HandBrake/HandBrakeCLI -u
bash: /home/zagor/HandBrake/HandBrakeCLI: No such file or directory

zagor@yumi:~/HandBrake$ ls
AUTHORS
BUILD
BuildContribsDarwin.sh
config.jam
configure
contrib
COPYING
CREDITS
CygWinContribBinariesVersion.txt
DownloadCygWinContribBinaries.sh
DownloadMacOsXContribBinaries.sh
Doxyfile
file.txt
HandBrakeCLI
jam
Jamfile
Jamrules
libhb
macosx
MacOsXContribBinariesVersion.txt
Makefile
Makefile.config
NEWS
qt4
scripts
test
THANKS
TRANSLATIONS
win