16 Mrz 2008 20:33:50 ERROR org.paxle.crawler.http.impl.HttpCrawler - Error crawling http://www.furl.net/storeIt.jsp?u=http://www.mkbergman.com/?p=415&t=Cytoscape: Hands-down Winner for Large-scale Graph Visualization: Transport exceptions: [org.apache.commons.httpclient.NoHttpResponseException] The server www.furl.net failed to respond org.apache.commons.httpclient.NoHttpResponseException: The server www.furl.net failed to respond at org.apache.commons.httpclient.HttpMethodBase.readStatusLine(HttpMethodBase.java:1835) at org.apache.commons.httpclient.HttpMethodBase.readResponse(HttpMethodBase.java:1590) at org.apache.commons.httpclient.HttpMethodBase.execute(HttpMethodBase.java:995) at org.apache.commons.httpclient.HttpMethodDirector.executeWithRetry(HttpMethodDirector.java:397) at org.apache.commons.httpclient.HttpMethodDirector.executeMethod(HttpMethodDirector.java:170) at org.apache.commons.httpclient.HttpClient.executeMethod(HttpClient.java:396) at org.apache.commons.httpclient.HttpClient.executeMethod(HttpClient.java:324) at org.paxle.crawler.http.impl.HttpCrawler.request(HttpCrawler.java:100) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:81) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:13) at org.paxle.core.threading.AWorker.run(AWorker.java:106) 16 Mrz 2008 20:34:12 ERROR org.paxle.crawler.http.impl.HttpCrawler - Error crawling http://www.shadows.com/features/tcr.htm?url=http://www.mkbergman.com/?p= at org.apache.commons.httpclient.MultiThreadedHttpConnectionManager$HttpConnectionAdapter.open(MultiThreadedHttpConnectionManager.java:1321) at org.apache.commons.httpclient.HttpMethodDirector.executeWithRetry(HttpMethodDirector.java:386) at org.apache.commons.httpclient.HttpMethodDirector.executeMethod(HttpMethodDirector.java:170) at org.apache.commons.httpclient.HttpClient.executeMethod(HttpClient.java:396) at org.apache.commons.httpclient.HttpClient.executeMethod(HttpClient.java:324) at org.paxle.crawler.http.impl.HttpCrawler.request(HttpCrawler.java:100) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:81) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:13) at org.paxle.core.threading.AWorker.run(AWorker.java:106) Caused by: java.net.SocketTimeoutException: connect timed out at java.net.PlainSocketImpl.socketConnect(Native Method) at java.net.PlainSocketImpl.doConnect(PlainSocketImpl.java:333) at java.net.PlainSocketImpl.connectToAddress(PlainSocketImpl.java:195) at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:182) 16 Mrz 2008 20:36:18 ERROR org.paxle.crawler.http.impl.HttpCrawler - Error crawling http://www.mkbergman.com/?m=200507: Transport exceptions: [java.io.IOException] chunked stream ended unexpectedly java.io.IOException: chunked stream ended unexpectedly at org.apache.commons.httpclient.ChunkedInputStream.getChunkSizeFromInputStream(ChunkedInputStream.java:251) at org.apache.commons.httpclient.ChunkedInputStream.nextChunk(ChunkedInputStream.java:220) at org.apache.commons.httpclient.ChunkedInputStream.read(ChunkedInputStream.java:175) at java.io.FilterInputStream.read(FilterInputStream.java:116) at org.apache.commons.httpclient.AutoCloseInputStream.read(AutoCloseInputStream.java:107) at org.paxle.crawler.CrawlerTools.copy(CrawlerTools.java:169) at org.paxle.crawler.CrawlerTools.copy(CrawlerTools.java:147) at org.paxle.crawler.CrawlerTools.saveInto(CrawlerTools.java:82) at org.paxle.crawler.http.impl.HttpCrawler.request(HttpCrawler.java:205) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:81) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:13) at org.paxle.core.threading.AWorker.run(AWorker.java:106) 16 Mrz 2008 20:36:34 WARN org.paxle.parser.impl.ParserWorker - Won't parse resource 'http://bioinformatics.org/rdfscape/'. Command status is: 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:36:34 ERROR org.paxle.core.queue.impl.FilteringOutputQueue - [org.paxle.parser.out] Filter 'org.paxle.core.filter.impl.AscendingPathUrlExtractionFilter' throwed an 'java.lang.NullPointerException' while processing 'http://bioinformatics.org/rdfscape/'. java.lang.NullPointerException at org.paxle.core.filter.impl.AscendingPathUrlExtractionFilter.filter(AscendingPathUrlExtractionFilter.java:42) at org.paxle.core.queue.impl.FilteringOutputQueue.filter(FilteringOutputQueue.java:92) at org.paxle.core.queue.impl.FilteringOutputQueue.enqueue(FilteringOutputQueue.java:54) at org.paxle.core.queue.impl.FilteringOutputQueue.enqueue(FilteringOutputQueue.java:14) at org.paxle.core.threading.AWorker.run(AWorker.java:109) 16 Mrz 2008 20:36:34 WARN org.paxle.indexer.impl.IndexerWorker - Won't index resource 'http://bioinformatics.org/rdfscape/'. Command status is: 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:36:34 WARN org.paxle.se.index.lucene.impl.LuceneWriter - Won't save document http://bioinformatics.org/rdfscape/ with result 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:37:05 WARN org.paxle.parser.impl.ParserWorker - Won't parse resource 'http://www.mkbergman.com/?m=200507'. Command status is: 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:37:05 ERROR org.paxle.core.queue.impl.FilteringOutputQueue - [org.paxle.parser.out] Filter 'org.paxle.core.filter.impl.AscendingPathUrlExtractionFilter' throwed an 'java.lang.NullPointerException' while processing 'http://www.mkbergman.com/?m=200507'. java.lang.NullPointerException at org.paxle.core.filter.impl.AscendingPathUrlExtractionFilter.filter(AscendingPathUrlExtractionFilter.java:42) at org.paxle.core.queue.impl.FilteringOutputQueue.filter(FilteringOutputQueue.java:92) at org.paxle.core.queue.impl.FilteringOutputQueue.enqueue(FilteringOutputQueue.java:54) at org.paxle.core.queue.impl.FilteringOutputQueue.enqueue(FilteringOutputQueue.java:14) er/cytoscape/plugins/Dot-Layout1.1.jar' not supported by any parser installed on the system. 16 Mrz 2008 20:37:05 WARN org.paxle.crawler.http.impl.HttpCrawler - Mimetype 'image/jpeg' of resource 'http://www.mkbergman.com/wp-content/themes/ai3/images/2008Posts/080128_umbel_session.jpg' not supported by any parser installed on the system. 16 Mrz 2008 20:37:12 WARN org.paxle.crawler.http.impl.HttpCrawler - Mimetype 'application/x-zip-compressed' of resource 'http://chianti.ucsd.edu/cyto_web/plugins/pluginjardownload.php?id=57' not supported by any parser installed on the system. 16 Mrz 2008 20:37:12 WARN org.paxle.crawler.http.impl.HttpCrawler - Mimetype 'application/x-zip-compressed' of resource 'http://chianti.ucsd.edu/cyto_web/plugins/pluginjardownload.php?id=53' not supported by any parser installed on the system. 16 Mrz 2008 20:37:24 WARN org.paxle.crawler.http.impl.HttpCrawler - Crawling of URL 'http://www.oracle.com/technology/software/tech/semantic_technologies/index.html' failed. Server returned: HTTP/1.1 406 Not Acceptable 16 Mrz 2008 20:37:27 ERROR org.paxle.crawler.http.impl.HttpCrawler - Error crawling http://www.unilever.com/: Unexpected exception: [java.nio.charset.IllegalCharsetNameException] UTF-8; Charset=UTF-8 java.nio.charset.IllegalCharsetNameException: UTF-8; Charset=UTF-8 at java.nio.charset.Charset.checkName(Charset.java:285) at java.nio.charset.Charset.lookup2(Charset.java:459) at java.nio.charset.Charset.lookup(Charset.java:438) at java.nio.charset.Charset.isSupported(Charset.java:480) at org.paxle.crawler.CrawlerTools.saveInto(CrawlerTools.java:49) at org.paxle.crawler.http.impl.HttpCrawler.request(HttpCrawler.java:205) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:81) at org.paxle.crawler.impl.CrawlerWorker.execute(CrawlerWorker.java:13) at org.paxle.core.threading.AWorker.run(AWorker.java:106) 16 Mrz 2008 20:37:28 WARN org.paxle.crawler.http.impl.HttpCrawler - Mimetype 'image/jpeg' of resource 'http://www.mkbergman.com/wp-content/themes/ai3/images/2008Posts/080128_music_organic.jpg' not supported by any parser installed on the system. 16 Mrz 2008 20:37:54 WARN org.paxle.parser.impl.ParserWorker - Won't parse resource 'http://www.unilever.com/'. Command status is: 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:37:54 WARN org.paxle.indexer.impl.IndexerWorker - Won't index resource 'http://www.unilever.com/'. Command status is: 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.) 16 Mrz 2008 20:37:54 WARN org.paxle.se.index.lucene.impl.LuceneWriter - Won't save document http://www.unilever.com/ with result 'Failure' (Crawler-document status is 'UNKNOWN_FAILURE'.)